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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51008639_51012640_R

Intron Information:

Intron Rank:

140211

Intron Class:

major

Intron Phase:

Intron Coordinates:

51008639 - 51012640

Intron Length:

4002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAAAC

5'SS Class:

major

3'SS Sequence:

GTTTTTCTGTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTAGGTTCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

70.1

33.8

Major BPS

71.8

0.54

1.2

32.5

Major PPT

0.7

81.2

36.5

Minor 5ss

39.2

-1.2

2.9

51.4

45.5

Minor BPS

43.6

-0.4

2.2

64.48

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019165

51007897 - 51017946

10050