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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51106928_51110127_R

Intron Information:

Intron Rank:

142403

Intron Class:

major

Intron Phase:

Intron Coordinates:

51106928 - 51110127

Intron Length:

3200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGGA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AGTTGTGGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.1

40.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

91.2

0.93

0.7

84.6

Minor 5ss

28.4

-2.5

3.5

38.3

46.7

Minor BPS

40.7

-0.6

2.3

61.12

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031617

51081742 - 51121273

39532

ENSAPLT00000018835

51106139 - 51121273

15135