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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5111611_5112411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5111611 - 5112411

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAA

U12 Branch Point Sequence:

CTCTCTTTTACA

Flanking Amino Acid:

DGRMLQYLTVNDLLFLKVTS

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

72.9

34.4

Major BPS

57.6

0.19

1.1

56.4

39.5

Major PPT

87.9

0.85

0.7

82.7

25.9

Minor 5ss

43.3

-0.7

2.9

52.2

Minor BPS

63.9

0.43

1.7

70.65

41.9

Associated Gene:

Gene:

PPFIBP2

Ensembl Gene ID:

ENSAPLG00000006571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019283

5106740 - 5191972

85233

ENSAPLT00000006855

5106740 - 5191972

85233

ENSAPLT00000046962

5106740 - 5191972

85233

ENSAPLT00000046570

5106740 - 5161838

55099

ENSAPLT00000034644

5106740 - 5191972

85233