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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51143862_51190127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51143862 - 51190127

Intron Length:

46266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTTTCTTTTATA

Flanking Amino Acid:

GTFGCHCQLSGKDEPSSYIC

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

30.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

91.5

0.93

0.6

Minor 5ss

29.8

-2.3

3.3

38.4

46.6

Minor BPS

72.9

0.71

1.5

82.82

31.5

Associated Gene:

Gene:

BCL11B

Ensembl Gene ID:

ENSAPLG00000028283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030581

51140207 - 51218426

78220