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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5115930_5117304_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5115930 - 5117304

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

GGGATGACTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GCTTCTTCATCT

Flanking Amino Acid:

DSEDNSILGLNRIRSVSAPV

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

73.4

36.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

48.4

-0

1.2

42.5

42.3

Minor 5ss

38.5

-1.3

3.3

49.1

41.3

Minor BPS

54.7

0.23

1.8

72.71

44.3

Associated Gene:

Gene:

PPFIBP2

Ensembl Gene ID:

ENSAPLG00000006571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019283

5106740 - 5191972

85233

ENSAPLT00000046962

5106740 - 5191972

85233

ENSAPLT00000046570

5106740 - 5161838

55099