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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51190344_51218060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51190344 - 51218060

Intron Length:

27717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

GTTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTTTCTATTG

Flanking Amino Acid:

GICPKQENIAGPSRPANLPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

73.8

0.59

1.3

72.8

Major PPT

88.7

0.87

0.7

81.3

36.4

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

49.1

-0.2

1.9

62.98

39.9

Associated Gene:

Gene:

BCL11B

Ensembl Gene ID:

ENSAPLG00000028283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030581

51140207 - 51218426

78220