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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51240795_51241079_R

Intron Information:

Intron Rank:

142792

Intron Class:

major

Intron Phase:

Intron Coordinates:

51240795 - 51241079

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TCCCCTCTGAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

69.7

41.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

64.8

0.33

61.1

33.7

Minor 5ss

39.1

-1.2

51.7

Minor BPS

43.9

-0.4

1.9

51.31

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039301

51240618 - 51297612

56995