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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51244023_51297447_R

Intron Information:

Intron Rank:

142794

Intron Class:

major

Intron Phase:

Intron Coordinates:

51244023 - 51297447

Intron Length:

53425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCACTCTTCATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

77.2

0.61

0.9

41.8

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

48.5

-0.2

1.8

52.74

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039301

51240618 - 51297612

56995