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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5126273_5128420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5126273 - 5128420

Intron Length:

2148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGATTTTTAATA

Flanking Amino Acid:

ESLLAANEEKDRRIEELTLL

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.8

75.1

33.3

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

64.7

0.46

1.2

65.15

35.2

Associated Gene:

Gene:

PPFIBP2

Ensembl Gene ID:

ENSAPLG00000006571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046570

5106740 - 5161838

55099

ENSAPLT00000034644

5106740 - 5191972

85233

ENSAPLT00000019283

5106740 - 5191972

85233

ENSAPLT00000006855

5106740 - 5191972

85233

ENSAPLT00000046962

5106740 - 5191972

85233