Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_5128483_5130190_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5128483 - 5130190

Intron Length:

1708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCCTT

5'SS Class:

major

3'SS Sequence:

AAAACATTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTCATAACA

Flanking Amino Acid:

EVYRRRLKEKHQEVQRLKIG

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

72.7

44.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

61.3

0.25

56.2

43.5

Minor 5ss

45.2

-0.5

3.1

64.9

39.7

Minor BPS

69.3

0.6

1.6

81.78

32.5

Associated Gene:

Gene:

PPFIBP2

Ensembl Gene ID:

ENSAPLG00000006571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019283

5106740 - 5191972

85233

ENSAPLT00000006855

5106740 - 5191972

85233