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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51319390_51323870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51319390 - 51323870

Intron Length:

4481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTGGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTGCTTGGATA

Flanking Amino Acid:

WDMCNHTNGLITTGYNLEDD

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

81.3

33.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.38

1.1

41.3

Minor 5ss

42.8

-0.8

3.4

61.3

44.6

Minor BPS

57.1

0.22

1.6

70.34

36.3

Associated Gene:

Gene:

SETD3

Ensembl Gene ID:

ENSAPLG00000005894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026496

51312090 - 51367829

55740

ENSAPLT00000028808

51312338 - 51358529

46192

ENSAPLT00000006152

51310271 - 51367829

57559

ENSAPLT00000028607

51310271 - 51367829

57559

ENSAPLT00000028102

51310271 - 51367829

57559

ENSAPLT00000027482

51310271 - 51348586

38316