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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51367234_51367709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

51367234 - 51367709

Intron Length:

476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

TTAACCTAACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

64.3

47.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

87.4

0.84

0.7

84.9

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

55.4

0.25

77.57

44.5

Associated Gene:

Gene:

SETD3

Ensembl Gene ID:

ENSAPLG00000005894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006152

51310271 - 51367829

57559