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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51371718_51372563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51371718 - 51372563

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

TTGTGGTTACCT

Flanking Amino Acid:

QFGQFGDDPKEEVMVLERIL

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

77.8

0.63

0.9

70.2

41.3

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

47.3

-0.1

2.6

75.11

47.7

Associated Gene:

Gene:

CCNK

Ensembl Gene ID:

ENSAPLG00000005513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005728

51369614 - 51465577

95964