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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51387339_51389113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51387339 - 51389113

Intron Length:

1775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAATAATG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

EKAIVREMCNVVWRKLGDAA

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

70.4

39.7

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

96.2

1.04

0.5

91.9

19.1

Minor 5ss

39.6

-1.2

3.1

54.3

42.7

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005671

51387249 - 51488003

100755

ENSAPLT00000005670

51387249 - 51487827

100579

ENSAPLT00000025171

51387249 - 51488003

100755