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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51389213_51396328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51389213 - 51396328

Intron Length:

7116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCTG

5'SS Class:

major

3'SS Sequence:

TGTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTTTTTTATA

Flanking Amino Acid:

KPEAVVHAMKVLEVHENLDR

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.7

44.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

88.1

0.86

0.7

84.2

30.9

Minor 5ss

33.7

-1.9

3.5

46.7

48.6

Minor BPS

60.6

0.33

1.5

70.81

35.2

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025171

51387249 - 51488003

100755

ENSAPLT00000005671

51387249 - 51488003

100755