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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51389213_51408691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51389213 - 51408691

Intron Length:

19479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGATCC

5'SS Class:

major

3'SS Sequence:

TGTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTTTTTTATA

Flanking Amino Acid:

LPQYQDALQNVLEVHENLDR

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

69.5

36.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

88.1

0.86

0.7

84.2

30.9

Minor 5ss

40.6

-1.1

51.5

38.3

Minor BPS

60.6

0.33

1.5

70.81

35.2

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005670

51387249 - 51487827

100579