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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51396425_51408691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51396425 - 51408691

Intron Length:

12267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGATCC

5'SS Class:

major

3'SS Sequence:

CTTATTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTATTTAAAC

Flanking Amino Acid:

LPQYQDALQNGPARMTSDLA

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

69.5

36.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.4

0.53

69.9

39.3

Minor 5ss

40.6

-1.1

51.5

38.3

Minor BPS

0.42

1.6

72.42

38.5

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005671

51387249 - 51488003

100755

ENSAPLT00000025171

51387249 - 51488003

100755