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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51408797_51425272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51408797 - 51425272

Intron Length:

16476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTCTTTGTCATT

Flanking Amino Acid:

LEDDNKLLSQQSSTGDLRTL

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.76

0.8

78.2

34.9

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

43.7

-0.4

2.3

62.87

42.6

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005671

51387249 - 51488003

100755