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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5141382_5149722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5141382 - 5149722

Intron Length:

8341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

ATAAAAATAACT

Flanking Amino Acid:

LNATEEMLQQELLSRTSLET

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

77.7

0.69

83.3

27.7

Major PPT

80.7

0.69

0.9

76.9

37.3

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

46.3

-0.2

68.26

41.1

Associated Gene:

Gene:

PPFIBP2

Ensembl Gene ID:

ENSAPLG00000006571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034644

5106740 - 5191972

85233

ENSAPLT00000019283

5106740 - 5191972

85233

ENSAPLT00000006855

5106740 - 5191972

85233

ENSAPLT00000046962

5106740 - 5191972

85233

ENSAPLT00000046570

5106740 - 5161838

55099