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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51415669_51425272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51415669 - 51425272

Intron Length:

9604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GGTTTCTAAATG

Flanking Amino Acid:

LEDDNKLLSQLADCNSLPRN

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.74

0.8

73.9

36.8

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

56.2

0.06

1.7

60.21

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025171

51387249 - 51488003

100755

ENSAPLT00000005670

51387249 - 51487827

100579