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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51425350_51487115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51425350 - 51487115

Intron Length:

61766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTTG

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TTTTTCCTAAAG

Flanking Amino Acid:

HHRSIPNGLNDSSSNYIRQL

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

66.1

42.1

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

81.7

0.71

0.9

83.3

25.8

Minor 5ss

42.5

-0.8

56.3

47.9

Minor BPS

62.3

0.25

1.8

73.24

38.9

Associated Gene:

Gene:

CCDC85C

Ensembl Gene ID:

ENSAPLG00000005496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005670

51387249 - 51487827

100579

ENSAPLT00000025171

51387249 - 51488003

100755

ENSAPLT00000005671

51387249 - 51488003

100755