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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51541358_51541902_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51541358 - 51541902

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCAG

5'SS Class:

major

3'SS Sequence:

GGTTTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTCACTGACCT

Flanking Amino Acid:

VMILSPEGVKEFLMSPQYSK

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

70.7

0.47

43.8

Minor 5ss

29.1

-2.4

3.4

38.3

46.7

Minor BPS

49.2

0.02

1.9

72.75

43.2

Associated Gene:

Gene:

CYP46A1

Ensembl Gene ID:

ENSAPLG00000004778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004984

51537722 - 51551766

14045