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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5154433_5175132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5154433 - 5175132

Intron Length:

20700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTAACTGTAAAA

Flanking Amino Acid:

CIREWFEENLSQVNHHSSTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.2

0.77

0.7

77.1

31.6

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

49.3

-0

2.1

66.23

39.9

Associated Gene:

Gene:

PPFIBP2

Ensembl Gene ID:

ENSAPLG00000006571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006855

5106740 - 5191972

85233

ENSAPLT00000046962

5106740 - 5191972

85233

ENSAPLT00000034644

5106740 - 5191972

85233

ENSAPLT00000019283

5106740 - 5191972

85233