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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51549773_51550041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51549773 - 51550041

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

TCTTTCTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

CGCAAATAAACT

Flanking Amino Acid:

VRIPANTTVIFSTYIMGRME

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

72.6

38.2

Major BPS

0.3

62.3

30.4

Major PPT

82.6

0.73

0.9

80.4

31.6

Minor 5ss

37.3

-1.4

3.2

56.2

42.2

Minor BPS

42.1

-0.5

55.55

45.8

Associated Gene:

Gene:

CYP46A1

Ensembl Gene ID:

ENSAPLG00000004778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004984

51537722 - 51551766

14045