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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51550131_51551072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51550131 - 51551072

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CAGTTTTGAATA

Flanking Amino Acid:

NPDRFSKDAPKPYYSYFPFS

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

93.2

0.97

0.6

89.1

19.8

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

51.7

0.05

1.4

56.23

37.6

Associated Gene:

Gene:

CYP46A1

Ensembl Gene ID:

ENSAPLG00000004778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004984

51537722 - 51551766

14045