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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51560392_51561860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51560392 - 51561860

Intron Length:

1469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTACAT

U12 Branch Point Sequence:

GGTTCCCTACAT

Flanking Amino Acid:

YLQKRPLLLKEYIALKGFRT

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

77.8

32.3

Major BPS

57.8

0.2

1.1

66.6

38.6

Major PPT

83.8

0.76

0.8

76.4

37.6

Minor 5ss

30.9

-2.2

3.3

46.1

Minor BPS

49.3

0.03

2.1

72.06

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004708

51556461 - 51563773

7313