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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51562038_51563316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51562038 - 51563316

Intron Length:

1279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CTTTGTTAAACT

Flanking Amino Acid:

FILTQQRTWTGRPLASFQSS

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

39.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

86.2

0.81

0.8

77.7

Minor 5ss

38.7

-1.3

2.9

47.6

Minor BPS

56.6

0.29

2.1

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004708

51556461 - 51563773

7313