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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51661609_51667384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51661609 - 51667384

Intron Length:

5776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGCATT

5'SS Class:

major

3'SS Sequence:

GCTTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GCTTGTTTTACA

Flanking Amino Acid:

AMQNKKGPTKARPLVQTLPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.2

75.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

82.2

0.72

0.9

75.5

38.3

Minor 5ss

47.8

-0.2

2.5

66.8

44.2

Minor BPS

49.6

-0

2.1

63.45

Associated Gene:

Gene:

EML1

Ensembl Gene ID:

ENSAPLG00000003949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018883

51634267 - 51712639

78373

ENSAPLT00000004087

51634267 - 51714020

79754