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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51681547_51682936_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51681547 - 51682936

Intron Length:

1390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

CTGTAATCACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GTCTCTGTAATC

Flanking Amino Acid:

SKPKEPMFSAGKRRVTHCKE

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

53.1

0.07

1.1

50.8

41.9

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

54.9

0.13

66.24

40.3

Associated Gene:

Gene:

EML1

Ensembl Gene ID:

ENSAPLG00000003949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040121

51593020 - 51714020

121001

ENSAPLT00000018883

51634267 - 51712639

78373