Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_51744820_51797737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51744820 - 51797737

Intron Length:

52918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTTCTCTTATTT

Flanking Amino Acid:

MYAFEEFSEQSICQARA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

79.1

0.72

69.3

38.4

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

68.2

0.65

1.5

84.89

35.8

Associated Gene:

Gene:

EVL

Ensembl Gene ID:

ENSAPLG00000003632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040535

51744797 - 51861119

116323