Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_51853595_51857058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51853595 - 51857058

Intron Length:

3464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTACT

5'SS Class:

major

3'SS Sequence:

TTCTTTTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGTAT

U12 Branch Point Sequence:

TGTCTCGTATTC

Flanking Amino Acid:

MEEMNKLLAKRRKAASQSDK

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

78.3

35.6

Major BPS

54.1

0.1

1.4

42.7

Major PPT

70.6

0.46

1.1

73.7

34.7

Minor 5ss

40.8

-1

2.4

53.1

43.6

Minor BPS

45.6

-0.3

2.2

59.82

39.7

Associated Gene:

Gene:

EVL

Ensembl Gene ID:

ENSAPLG00000003632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040535

51744797 - 51861119

116323

ENSAPLT00000031994

51769056 - 51861119

92064

ENSAPLT00000003752

51722680 - 51865009

142330

ENSAPLT00000047688

51722680 - 51865009

142330

ENSAPLT00000003748

51797398 - 51864440

67043

ENSAPLT00000045987

51790149 - 51861119

70971