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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51912999_51915401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51912999 - 51915401

Intron Length:

2403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TATCTACTAATT

Flanking Amino Acid:

APRTIACPHKGCTKMFRDNS

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

75.8

0.58

79.5

32.9

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

49.4

0.03

1.9

72.61

37.8

Associated Gene:

Gene:

YY1

Ensembl Gene ID:

ENSAPLG00000029158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041862

51894471 - 51916935

22465

ENSAPLT00000023615

51894471 - 51916845

22375