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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51915561_51916662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51915561 - 51916662

Intron Length:

1102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTTA

5'SS Class:

major

3'SS Sequence:

TTCCTTTCAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTCCTTTCAACA

Flanking Amino Acid:

LVHTGEKPFQCTFEGCGKRF

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

70.3

36.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.1

0.68

0.8

76.9

30.3

Minor 5ss

46.5

-0.4

3.1

64.4

Minor BPS

58.4

0.26

1.5

68.33

38.3

Associated Gene:

Gene:

YY1

Ensembl Gene ID:

ENSAPLG00000029158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023615

51894471 - 51916845

22375

ENSAPLT00000041862

51894471 - 51916935

22465