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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51928240_51928857_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51928240 - 51928857

Intron Length:
618

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTAAGTATG

5'SS Class:
major

3'SS Sequence:
CTTCTTCCATCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAA

U12 Branch Point Sequence:
CCTTCTTCCATC

Flanking Amino Acid:
CFQSIIKQESAFGLYKGIGS

Intron Amino Acid Position:
55

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
75.1
40.8

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
78.9
0.65
0.8
78.4
28.8

Minor 5ss
42.3
-0.9
2.9
61.4
42.8

Minor BPS
47.4
-0.2
1.9
57.42
42.5

Associated Gene:

Gene:
SLC25A29

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51927496 - 51934772
7277