Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_51928396_51928857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51928396 - 51928857

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

GTTTGTGTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TACCACTAAAAA

Flanking Amino Acid:

LLSVHHKARICSDVQSNIRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

53.6

0.09

59.9

32.5

Major PPT

69.9

0.45

61.7

44.5

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

46.4

-0.2

1.9

56.55

41.9

Associated Gene:

Gene:

SLC25A29

Ensembl Gene ID:

ENSAPLG00000003418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017769

51927496 - 51934749

7254