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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51947344_51953151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51947344 - 51953151

Intron Length:

5808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCAAAA

U12 Branch Point Sequence:

TCTCCAAAAACC

Flanking Amino Acid:

MDFIAGAIGGGLSTAVGYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

55.5

0.14

61.5

32.5

Major PPT

82.1

0.72

0.8

79.8

32.2

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

45.7

-0.3

2.1

62.25

42.8

Associated Gene:

Gene:

SLC25A47

Ensembl Gene ID:

ENSAPLG00000003342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003411

51947027 - 51956958

9932