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Intron Name: Anas_platyrhynchos_platyrhynchos_5_51954921_51955827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51954921 - 51955827

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAA

U12 Branch Point Sequence:

AAGGCCGGAGGT

Flanking Amino Acid:

WLTPAGKNKPGFLVVLLSGG

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

50.7

0.02

1.5

63.4

44.3

Major PPT

71.6

0.49

0.8

65.1

30.6

Minor 5ss

-1.4

3.1

50.1

46.4

Minor BPS

35.2

-1

2.3

48.07

44.5

Associated Gene:

Gene:

SLC25A47

Ensembl Gene ID:

ENSAPLG00000003342

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003411

51947027 - 51956958

9932