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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52180703_52181295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52180703 - 52181295

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGATTTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TATTATTTGATT

Flanking Amino Acid:

ERTGELLELQASAAEMEKIR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

81.3

32.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

78.8

0.65

0.9

74.1

36.4

Minor 5ss

30.6

-2.2

2.6

36.7

40.4

Minor BPS

65.8

0.58

1.4

80.61

35.1

Associated Gene:

Gene:

BEGAIN

Ensembl Gene ID:

ENSAPLG00000002887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002914

52067014 - 52181373

114360