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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52223617_52226613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

52223617 - 52226613

Intron Length:

2997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

ACCCATCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

ACAGCTCTACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

66.3

0.41

37.5

Major PPT

69.5

0.44

0.9

61.2

34.2

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

43.4

-0.5

1.9

49.63

Associated Gene:

Gene:

BEGAIN

Ensembl Gene ID:

ENSAPLG00000002887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017767

52067014 - 52227375

160362

ENSAPLT00000045612

52067014 - 52227375

160362

ENSAPLT00000018409

52067014 - 52227375

160362