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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52236970_52272399_F

Intron Information:

Intron Rank:

143383

Intron Class:

major

Intron Phase:

Intron Coordinates:

52236970 - 52272399

Intron Length:

35430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGACTG

5'SS Class:

major

3'SS Sequence:

GCTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TGACACTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.3

66.4

45.1

Major BPS

68.1

0.45

58.1

38.5

Major PPT

86.7

0.83

0.7

84.6

30.3

Minor 5ss

-2.2

3.1

39.3

45.9

Minor BPS

1.7

67.49

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039701

52236719 - 52272567

35849