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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5227635_5228597_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
5227635 - 5228597

Intron Length:
963

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGTGCT

5'SS Class:
strong_major

3'SS Sequence:
GTTTTAACTCAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAC

U12 Branch Point Sequence:
TGTGTTTTAACT

Flanking Amino Acid:
YIDRRILSLENRLDKCNQDI

Intron Amino Acid Position:
43

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.4
0.91
0.8
80.6
31.9

Major BPS
89.7
0.98
0.7
89.9
20

Major PPT
65.9
0.36
1.1
62.6
42.5

Minor 5ss
41.4
-1
3.1
59
45.7

Minor BPS
72.4
0.78
1.3
83.79
37.4

Associated Gene:

Gene:
OLFML1

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5223534 - 5228723
5190