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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52284776_52290710_F

Intron Information:

Intron Rank:

146784

Intron Class:

major

Intron Phase:

Intron Coordinates:

52284776 - 52290710

Intron Length:

5935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATTACTGTACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.54

69.1

40.7

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

55.5

0.25

79.54

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020710

52284496 - 52290887

6392