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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52406049_52412192_R

Intron Information:

Intron Rank:

144877

Intron Class:

major

Intron Phase:

Intron Coordinates:

52406049 - 52412192

Intron Length:

6144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TTATTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

68.8

43.8

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

84.4

0.77

0.8

77.8

36.3

Minor 5ss

32.2

-2

3.1

46.1

Minor BPS

56.7

0.29

2.2

86.34

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031123

52405719 - 52412367

6649