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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52552185_52562953_R

Intron Information:

Intron Rank:

134083

Intron Class:

major

Intron Phase:

Intron Coordinates:

52552185 - 52562953

Intron Length:

10769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTTGTTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.2

0.57

74.3

40.6

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

60.5

0.41

1.3

74.33

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039827

52549861 - 52563298

13438