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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52563299_52574130_R

Intron Information:

Intron Rank:

134079

Intron Class:

major

Intron Phase:

Intron Coordinates:

52563299 - 52574130

Intron Length:

10832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CACTTTATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTTTCTGACACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.8

33.6

Major BPS

75.1

0.62

65.6

Major PPT

69.2

0.43

64.9

39.8

Minor 5ss

36.8

-1.5

2.7

42.7

38.3

Minor BPS

-0.1

2.6

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025397

52550486 - 52574337

23852