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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52798527_52814093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52798527 - 52814093

Intron Length:

15567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTCAAAC

Flanking Amino Acid:

KDGQENQEHEVSNKKSNSAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

100

1.24

0.5

100

Major PPT

77.1

0.61

0.9

74.1

34.4

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

56.1

0.17

1.6

67.06

38.8

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022