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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52847755_52855254_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52847755 - 52855254

Intron Length:

7500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CGTGTGATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

GAGTTCTTAAAG

Flanking Amino Acid:

EPIYPEVVHMFAVNMFRTLP

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

71.1

0.47

66.1

44.1

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

60.2

0.18

1.5

58.43

42.8

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022

ENSAPLT00000016697

52827105 - 52875990

48886