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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52856096_52856207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52856096 - 52856207

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAA

U12 Branch Point Sequence:

TTCAGGTAAAGT

Flanking Amino Acid:

KYIDQKFVLQLLELFDSEDP

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

51.3

0.03

1.3

53.4

40.4

Major PPT

88.6

0.87

0.6

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

37.9

-0.8

2.7

59.56

49.6

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022

ENSAPLT00000016697

52827105 - 52875990

48886