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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52856339_52858368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52856339 - 52858368

Intron Length:

2030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTATT

Flanking Amino Acid:

IRKQINNIFYRFIYETEHHN

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

73.5

37.1

Major BPS

100

1.24

0.5

100

Major PPT

78.1

0.63

0.9

77.7

35.6

Minor 5ss

33.7

-1.9

3.2

47.5

Minor BPS

67.6

0.63

1.9

89.45

34.7

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022

ENSAPLT00000016697

52827105 - 52875990

48886