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Intron Name: Anas_platyrhynchos_platyrhynchos_5_52858429_52860500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52858429 - 52860500

Intron Length:

2072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATTTTTTAATT

Flanking Amino Acid:

GIAELLEILGSIINGFALPL

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

0.9

72.6

32.3

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

79.8

1.01

88.33

30.2

Associated Gene:

Gene:

PPP2R5C

Ensembl Gene ID:

ENSAPLG00000015971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034295

52796969 - 52875990

79022

ENSAPLT00000016697

52827105 - 52875990

48886